RBFE network

Selected edges are shown below with both ligands drawn side by side. The warm highlight is the soft-core region that changes during the transformation; the cool highlight is the common core that stays fixed. Counterpoised (CBFE) edges are marked separately: they run two absolute calculations in opposite directions rather than morphing one ligand into the other, so both molecules are entirely soft-core and there is no common core to show.

16
Ligands
23
Edges
23
CBFE edges
0
Repaired
0
Rejected
mst
Planner

Diagnostics

Network-level metrics. Machine time is estimated from published per-edge measurements and is a report only -- it played no part in choosing these edges.

MetricValue
Total cost236.350 scorer units
Estimated machine time292.2 GPU-hours (about $116.88)
Mean cost per edge10.276
Degreemin 2 · mean 2.88 · max 15
Isolated ligandsnone
Diameter2
Short cycles9 of length ≤ 4
Robustness92% of 100 trials stay connected at 5% edge failure; 15.9 ligands retained on average

23 edges over 16 ligands is 22 below the n*ln(n) precision floor of 45 (Pitman 2023). Below that floor precision degrades faster as the series grows; raise --edges-per-ligand or --n-edges to buy it back.

Network

ejm31 - ejm42: CBFE, cost 10.150ejm31 - ejm43: CBFE, cost 10.200ejm31 - ejm44: CBFE, cost 10.250ejm31 - ejm45: CBFE, cost 10.250ejm31 - ejm46: CBFE, cost 10.200ejm31 - ejm47: CBFE, cost 10.250ejm31 - ejm48: CBFE, cost 10.300ejm31 - ejm49: CBFE, cost 10.350ejm31 - ejm50: CBFE, cost 10.150ejm31 - ejm54: CBFE, cost 10.200ejm31 - ejm55: CBFE, cost 10.150ejm31 - jmc23: CBFE, cost 10.250ejm31 - jmc27: CBFE, cost 10.250ejm31 - jmc28: CBFE, cost 10.250ejm31 - jmc30: CBFE, cost 10.300ejm42 - ejm49: CBFE, cost 10.400ejm42 - ejm50: CBFE, cost 10.200ejm43 - ejm55: CBFE, cost 10.250ejm44 - ejm45: CBFE, cost 10.400ejm46 - ejm54: CBFE, cost 10.300ejm47 - jmc23: CBFE, cost 10.400ejm48 - jmc30: CBFE, cost 10.500jmc27 - jmc28: CBFE, cost 10.400ejm31 (degree 15)ejm31ejm31ejm42 (degree 3)ejm42ejm42ejm43 (degree 2)ejm43ejm43ejm44 (degree 2)ejm44ejm44ejm45 (degree 2)ejm45ejm45ejm46 (degree 2)ejm46ejm46ejm47 (degree 2)ejm47ejm47ejm48 (degree 2)ejm48ejm48ejm49 (degree 2)ejm49ejm49ejm50 (degree 2)ejm50ejm50ejm54 (degree 2)ejm54ejm54ejm55 (degree 2)ejm55ejm55jmc23 (degree 2)jmc23jmc23jmc27 (degree 2)jmc27jmc27jmc28 (degree 2)jmc28jmc28jmc30 (degree 2)jmc30jmc30

Thicker edges are cheaper. Hollow red nodes are unconnected. Violet edges are counterpoised (CBFE). Click a network edge or the index below to jump to its transformation card.

Selected edges

soft-core (transformed)common core (held fixed)RBFE edgeCBFE edge (counterpoised)
ejm31~ejm42CBFEcost 10.150 · 32/35 atoms fully decoupled · no atom mappingejm31~ejm50CBFEcost 10.150 · 32/33 atoms fully decoupled · no atom mappingejm31~ejm55CBFEcost 10.150 · 32/33 atoms fully decoupled · no atom mappingejm31~ejm43CBFEcost 10.200 · 32/38 atoms fully decoupled · no atom mappingejm31~ejm46CBFEcost 10.200 · 32/36 atoms fully decoupled · no atom mappingejm31~ejm54CBFEcost 10.200 · 32/37 atoms fully decoupled · no atom mappingejm50~ejm42CBFEcost 10.200 · 33/35 atoms fully decoupled · no atom mappingejm31~ejm44CBFEcost 10.250 · 32/41 atoms fully decoupled · no atom mappingejm31~ejm45CBFEcost 10.250 · 32/39 atoms fully decoupled · no atom mappingejm31~ejm47CBFEcost 10.250 · 32/39 atoms fully decoupled · no atom mappingejm31~jmc23CBFEcost 10.250 · 32/36 atoms fully decoupled · no atom mappingejm31~jmc27CBFEcost 10.250 · 32/36 atoms fully decoupled · no atom mappingejm31~jmc28CBFEcost 10.250 · 32/39 atoms fully decoupled · no atom mappingejm55~ejm43CBFEcost 10.250 · 33/38 atoms fully decoupled · no atom mappingejm31~ejm48CBFEcost 10.300 · 32/42 atoms fully decoupled · no atom mappingejm31~jmc30CBFEcost 10.300 · 32/37 atoms fully decoupled · no atom mappingejm46~ejm54CBFEcost 10.300 · 36/37 atoms fully decoupled · no atom mappingejm31~ejm49CBFEcost 10.350 · 32/39 atoms fully decoupled · no atom mappingejm42~ejm49CBFEcost 10.400 · 35/39 atoms fully decoupled · no atom mappingejm45~ejm44CBFEcost 10.400 · 39/41 atoms fully decoupled · no atom mappingjmc23~ejm47CBFEcost 10.400 · 36/39 atoms fully decoupled · no atom mappingjmc27~jmc28CBFEcost 10.400 · 36/39 atoms fully decoupled · no atom mappingjmc30~ejm48CBFEcost 10.500 · 37/42 atoms fully decoupled · no atom mapping

ejm31~ejm42CBFE

cost 10.150 · 32/35 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~ejm50CBFE

cost 10.150 · 32/33 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~ejm55CBFE

cost 10.150 · 32/33 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~ejm43CBFE

cost 10.200 · 32/38 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~ejm46CBFE

cost 10.200 · 32/36 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~ejm54CBFE

cost 10.200 · 32/37 atoms fully decoupled · no atom mapping · protocol cbfe

ejm50~ejm42CBFE

cost 10.200 · 33/35 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~ejm44CBFE

cost 10.250 · 32/41 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~ejm45CBFE

cost 10.250 · 32/39 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~ejm47CBFE

cost 10.250 · 32/39 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~jmc23CBFE

cost 10.250 · 32/36 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~jmc27CBFE

cost 10.250 · 32/36 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~jmc28CBFE

cost 10.250 · 32/39 atoms fully decoupled · no atom mapping · protocol cbfe

ejm55~ejm43CBFE

cost 10.250 · 33/38 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~ejm48CBFE

cost 10.300 · 32/42 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~jmc30CBFE

cost 10.300 · 32/37 atoms fully decoupled · no atom mapping · protocol cbfe

ejm46~ejm54CBFE

cost 10.300 · 36/37 atoms fully decoupled · no atom mapping · protocol cbfe

ejm31~ejm49CBFE

cost 10.350 · 32/39 atoms fully decoupled · no atom mapping · protocol cbfe

ejm42~ejm49CBFE

cost 10.400 · 35/39 atoms fully decoupled · no atom mapping · protocol cbfe

ejm45~ejm44CBFE

cost 10.400 · 39/41 atoms fully decoupled · no atom mapping · protocol cbfe

jmc23~ejm47CBFE

cost 10.400 · 36/39 atoms fully decoupled · no atom mapping · protocol cbfe

jmc27~jmc28CBFE

cost 10.400 · 36/39 atoms fully decoupled · no atom mapping · protocol cbfe

jmc30~ejm48CBFE

cost 10.500 · 37/42 atoms fully decoupled · no atom mapping · protocol cbfe